Cecile Lorrain

Fungal regulatory genomics & evolution

Effector-Mining in the Poplar Rust Fungus Melampsora larici-populina Secretome


Journal article


Cécile Lorrain, Arnaud Hecker, S. Duplessis
Frontiers in Plant Science, 2015

Semantic Scholar DOI PubMedCentral PubMed
Cite

Cite

APA   Click to copy
Lorrain, C., Hecker, A., & Duplessis, S. (2015). Effector-Mining in the Poplar Rust Fungus Melampsora larici-populina Secretome. Frontiers in Plant Science.


Chicago/Turabian   Click to copy
Lorrain, Cécile, Arnaud Hecker, and S. Duplessis. “Effector-Mining in the Poplar Rust Fungus Melampsora Larici-Populina Secretome.” Frontiers in Plant Science (2015).


MLA   Click to copy
Lorrain, Cécile, et al. “Effector-Mining in the Poplar Rust Fungus Melampsora Larici-Populina Secretome.” Frontiers in Plant Science, 2015.


BibTeX   Click to copy

@article{c2015a,
  title = {Effector-Mining in the Poplar Rust Fungus Melampsora larici-populina Secretome},
  year = {2015},
  journal = {Frontiers in Plant Science},
  author = {Lorrain, Cécile and Hecker, Arnaud and Duplessis, S.}
}

Abstract

The poplar leaf rust fungus, Melampsora larici-populina has been established as a tree-microbe interaction model. Understanding the molecular mechanisms controlling infection by pathogens appears essential for durable management of tree plantations. In biotrophic plant-parasites, effectors are known to condition host cell colonization. Thus, investigation of candidate secreted effector proteins (CSEPs) is a major goal in the poplar–poplar rust interaction. Unlike oomycetes, fungal effectors do not share conserved motifs and candidate prediction relies on a set of a priori criteria established from reported bona fide effectors. Secretome prediction, genome-wide analysis of gene families and transcriptomics of M. larici-populina have led to catalogs of more than a thousand secreted proteins. Automatized effector-mining pipelines hold great promise for rapid and systematic identification and prioritization of CSEPs for functional characterization. In this review, we report on and discuss the current status of the poplar rust fungus secretome and prediction of candidate effectors from this species.


Share

Tools
Translate to